RNA-seq data- 12 hrs and 24 hrs for C. beijerinckii NCIMB 8052 WT versus agrB mutants
Description
RNA-seq data from three independent agrB mutants made in C. beijerinckii NCIMB 8052. Mutations were made in three different Agr systems, denoted by Agr2, Agr4 and Agr5. Total RNA was extracted from three replicates of each agrB mutant and the WT. RNA sequencing and analysis was carried out by DeepSeq (University of Nottingham). Mutants were compared to the WT gene expression at both 12 and 24 hour sampling points (Grown in glucose containing media).
External URI
Subjects
- Genetics
- RNA – Analysis
- Nucleotide sequence
- Quorum sensing (Microbiology)
- Clostridium -- Research -- Methodology
- Sequence Analysis, RNA – methods
- RNA – genetics
- Quorum Sensing
- Clostridium
- RNA-seq, Agr, Quorum sensing, Clostridium beijerinckii
- Biological Sciences::Molecular biology, biophysics & biochemistry
- Q Science::QR Microbiology
- QS-QZ Preclinical sciences (NLM Classification)::QW Microbiology. Immunology::QW1 Microbiology
Divisions
- University of Nottingham, UK Campus
Research institutes and centres
- University of Nottingham, UK Campus::Biomolecular Sciences, Centre for
Deposit date
2023-11-17Data type
RNA-seq dataFunders
- Biotechnology & biological Sciences Research Council
Collection dates
- May 2022 - October 2022
Data collection method
Data collection protocolResource languages
- en